Basic Research Software https://informatics-analytics.dfci.harvard.edu/ en GPT4DFCI https://informatics-analytics.dfci.harvard.edu/gpt4dfci <span class="field field--name-title field--type-string field--label-hidden">GPT4DFCI</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/155" typeof="schema:Person" property="schema:name" datatype="">biodata</span></span> <span class="field field--name-created field--type-created field--label-hidden">Wed, 03/27/2024 - 19:49</span> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>GPT4DFCI, a private, secure, HIPAA-compliant generative AI tool based on GPT and o1 models, is now available to Dana-Farber&nbsp;workforce members to try out for work purposes, excluding clinical care.</p> <p><strong>To request access:</strong></p> <ol> <li>If working remotely, be sure you're connected to VPN.</li> <li>Visit the&nbsp;<a href="https://dfciservicerequest.dfci.harvard.edu/?RelayState=GPT4DFCI" rel=" noopener" target="_blank">Informatics &amp; Analytics GPT4DFCI sign-up page</a>.</li> <li>Log in with your MGB username and password.</li> <li>Complete and submit the ticket.</li> <li>Once your access is granted, visit <a href="https://gpt4dfci.dfci.harvard.edu" rel=" noopener" target="_blank">https://gpt4dfci.dfci.harvard.edu</a>&nbsp;</li> </ol> <p>Please review Dana-Farber’s&nbsp;<a href="https://dfcipolicies.ellucid.com/documents/view/9473" rel=" noopener" target="_blank"><strong>new policy on acceptable use of generative AI</strong></a>. Workforce members are required to use generative AI systems in a manner that maintains the protection of protected health information (PHI), personally identifiable information (PII), and other confidential information. It also must be used in a manner that maintains the integrity required for scientific analysis as well as generation of scientific content such as text, images, graphics, and figures.</p> <p><em>Please remember,&nbsp;publicly available AI tools can pose significant privacy and security risks. For this reason, only Dana-Farber-approved AI tools can be used for work purposes.</em></p> <p>Do you want to discuss an idea for a custom GPT? Would you like API access? <a href="https://informatics-analytics.dfci.harvard.edu/groups/artificial-intelligence-operations-data-science-services">Get in touch</a>.</p> <p><strong>More information: </strong><a href="https://www.dana-farber.org/newsroom/news-releases/2024/private-and-secure-generative-ai-tool-supports-operations-and-research-at-dana-farber">GPT4DFCI Press Release</a>.</p> </div> <div class="field field--name-field-users field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/30" hreflang="en">Analytics users</a></div> <div class="field__item"><a href="/taxonomy/term/20" hreflang="en">Basic researchers</a></div> <div class="field__item"><a href="/taxonomy/term/17" hreflang="en">Belfer Office for Dana-Farber Innovations (BODFI)</a></div> <div class="field__item"><a href="/taxonomy/term/14" hreflang="en">Budget office</a></div> <div class="field__item"><a href="/taxonomy/term/11" hreflang="en">Clinical researchers</a></div> <div class="field__item"><a href="/taxonomy/term/13" hreflang="en">Clinical trial administration</a></div> <div class="field__item"><a href="/taxonomy/term/18" hreflang="en">Office of General Council</a></div> <div class="field__item"><a href="/taxonomy/term/15" hreflang="en">Pharmacy</a></div> <div class="field__item"><a href="/taxonomy/term/16" hreflang="en">Research administrators</a></div> <div class="field__item"><a href="/taxonomy/term/12" hreflang="en">Research staff</a></div> </div> <div class="field field--name-field-fast-find-service-link field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/8" hreflang="en">Technical Support</a></div> Wed, 27 Mar 2024 23:49:12 +0000 biodata 200 at https://informatics-analytics.dfci.harvard.edu ChemDraw https://informatics-analytics.dfci.harvard.edu/chemdraw <span class="field field--name-title field--type-string field--label-hidden">ChemDraw</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" typeof="schema:Person" property="schema:name" datatype="">Anonymous (not verified)</span></span> <span class="field field--name-created field--type-created field--label-hidden">Tue, 08/03/2021 - 17:46</span> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>ChemDraw is a molecule editor and chemistry communication suite for&nbsp;the transformation of chemical drawings into shareable chemical knowledge.</p> </div> <div class="field field--name-field-users field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/20" hreflang="en">Basic researchers</a></div> </div> <div class="field field--name-field-access-and-support-url-or- field--type-link field--label-hidden field__item"><a href="https://wiki.dfci.harvard.edu:8443/rcsud/frontline-support/application-licensing-and-installation/chemdraw">RCS Wiki: Chemdraw</a></div> Tue, 03 Aug 2021 21:46:15 +0000 Anonymous 150 at https://informatics-analytics.dfci.harvard.edu Websites for research and clinical programs https://informatics-analytics.dfci.harvard.edu/websites-research-and-clinical-programs <span class="field field--name-title field--type-string field--label-hidden">Websites for research and clinical programs</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/2" hreflang="en">DF/HCC</a></div> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> <div class="field__item"><a href="/taxonomy/term/3" hreflang="en">Outside participating sites</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/1" typeof="schema:Person" property="schema:name" datatype="">admin</span></span> <span class="field field--name-created field--type-created field--label-hidden">Mon, 12/07/2020 - 14:11</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">Graphic design, content, programming, social media, and hosting </div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>DFCI’s <a href="http://www.healthcommcore.org" rel="noopener noreferrer" target="_blank">Health Communication Core</a> develops websites ranging from simple, static sites to complex, interactive web applications. The HCC creative team provides professional writing, graphic design, programming, social media, and strategy development services for:</p> <ul> <li>Research recruitment/retention</li> <li>Online interventions</li> <li>Decision aid development</li> <li>Research dissemination</li> <li>Awareness and outreach</li> </ul> <p>Contact <a href="mailto:health_communication@dfci.harvard.edu" rel="noopener noreferrer" target="_blank">health_communication@dfci.harvard.edu</a> to explore how HCC can help strengthen your online presence.</p> </div> <div class="field field--name-field-users field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/20" hreflang="en">Basic researchers</a></div> <div class="field__item"><a href="/taxonomy/term/11" hreflang="en">Clinical researchers</a></div> </div> <div class="field field--name-field-fast-find-service-link field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/4" hreflang="en">Basic Research Software</a></div> Mon, 07 Dec 2020 19:11:39 +0000 admin 131 at https://informatics-analytics.dfci.harvard.edu Lab Websites https://informatics-analytics.dfci.harvard.edu/lab-websites <span class="field field--name-title field--type-string field--label-hidden">Lab Websites</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/7" typeof="schema:Person" property="schema:name" datatype="">KRT9</span></span> <span class="field field--name-created field--type-created field--label-hidden">Thu, 06/04/2020 - 09:14</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">Develop and maintain lab websites</div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>DFCI's Communications Department offers a&nbsp;Lab Website Program (LWP) at no cost, utilizing DFCI branded templates&nbsp;designed for non-technical professionals to learn and use.<br /> Contact to get started:&nbsp;<a href="mailto:luise_dittrich@dfci.harvard.edu">Luise Dittrich</a>&nbsp;-&nbsp;Project Manager, LWP.</p> </div> <div class="field field--name-field-users field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/20" hreflang="en">Basic researchers</a></div> <div class="field__item"><a href="/taxonomy/term/12" hreflang="en">Research staff</a></div> </div> <div class="field field--name-field-fast-find-service-link field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/8" hreflang="en">Technical Support</a></div> Thu, 04 Jun 2020 13:14:41 +0000 KRT9 119 at https://informatics-analytics.dfci.harvard.edu Visio https://informatics-analytics.dfci.harvard.edu/visio <span class="field field--name-title field--type-string field--label-hidden">Visio</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/7" typeof="schema:Person" property="schema:name" datatype="">KRT9</span></span> <span class="field field--name-created field--type-created field--label-hidden">Thu, 11/07/2019 - 10:23</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">Diagramming and vector graphics app often used to map workflows</div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>Visio licenses are obtained by submitting an IS Service Desk request.</p> </div> <div class="field field--name-field-access-and-support-url-or- field--type-link field--label-hidden field__item"><a href="https://partnershealthcare.service-now.com/isservicehub?id=sc_cat_item&amp;sys_id=ae254c98db0e770092a580c74b961928">Microsoft Office/Office 365 Requests</a></div> <div class="field field--name-field-fast-find-service-link field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/8" hreflang="en">Technical Support</a></div> Thu, 07 Nov 2019 15:23:42 +0000 KRT9 94 at https://informatics-analytics.dfci.harvard.edu FileMaker Pro https://informatics-analytics.dfci.harvard.edu/filemaker-pro <span class="field field--name-title field--type-string field--label-hidden">FileMaker Pro</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/7" typeof="schema:Person" property="schema:name" datatype="">KRT9</span></span> <span class="field field--name-created field--type-created field--label-hidden">Wed, 10/16/2019 - 12:27</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">Tool used to create custom apps</div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>FileMaker Pro Advanced includes a set of advanced tools to help you design and develop custom apps faster and easier. Plus, you’ll get robust analysis capabilities, powerful diagnostic tools, and much more.<br /> Partners offers FileMaker Pro free to clients as long as they host your database.&nbsp;</p> </div> <div class="field field--name-field-access-and-support-url-or- field--type-link field--label-hidden field__item"><a href="https://rc.partners.org/kb/article/3626">FileMaker Pro 18 download</a></div> <div class="field field--name-field-fast-find-service-link field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/4" hreflang="en">Basic Research Software</a></div> Wed, 16 Oct 2019 16:27:58 +0000 KRT9 92 at https://informatics-analytics.dfci.harvard.edu Code42 (CrashPlan) https://informatics-analytics.dfci.harvard.edu/code42-crashplan <span class="field field--name-title field--type-string field--label-hidden">Code42 (CrashPlan)</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/7" typeof="schema:Person" property="schema:name" datatype="">KRT9</span></span> <span class="field field--name-created field--type-created field--label-hidden">Thu, 09/19/2019 - 20:33</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">Desktop & laptop backups</div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>Code42,&nbsp;previously known as CrashPlan, is a backup software solution provided by Research Computing Infrastructure for the protection of desktop and laptop computers. It allows you to protect your local machine's files on network storage for safekeeping.&nbsp;<br /> Please note that we don't consider local external storage media solutions like TimeMachine to be sufficient as a backup solution for research data. While local external storage solutions can be useful, they can and do fail.</p> </div> <div class="field field--name-field-users field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/20" hreflang="en">Basic researchers</a></div> </div> <div class="field field--name-field-access-and-support-common- field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/29" hreflang="en">Research Computing Infrastructure request form</a></div> <div class="field field--name-field-fast-find-service-link field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/4" hreflang="en">Basic Research Software</a></div> Fri, 20 Sep 2019 00:33:27 +0000 KRT9 74 at https://informatics-analytics.dfci.harvard.edu UCSC Genome Browser https://informatics-analytics.dfci.harvard.edu/ucsc-genome-browser <span class="field field--name-title field--type-string field--label-hidden">UCSC Genome Browser</span> <div class="field field--name-field-institutions field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/1" hreflang="en">DFCI</a></div> </div> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/7" typeof="schema:Person" property="schema:name" datatype="">KRT9</span></span> <span class="field field--name-created field--type-created field--label-hidden">Wed, 09/04/2019 - 11:14</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">Interactive website offering access to genome sequence data</div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>UCSC Genome Browser is an interactive website offering access to genome sequence data from a variety of vertebrate and invertebrate species and major model organisms, integrated with a large collection of aligned annotations. The Browser is a graphical viewer optimized to support fast, interactive performance. It is an open-source, web-based tool suite built on top of a MySQL database for rapid visualization, examination, and querying of data at many levels.&nbsp;</p> <p>The UCSC Genome Browser is developed and maintained by the Genome Bioinformatics Group, a cross-departmental team within the&nbsp;UCSC Genomics Institute. For more information about Genome Browser, you can visit the&nbsp;<a href="https://genome.ucsc.edu/" target="_blank">UCSC website</a>&nbsp;and&nbsp;<a href="http://genome.ucsc.edu/FAQ/" target="_blank">FAQs</a>. You can access the Genome Browser via <a href="http://g4.dfci.harvard.edu/cgi-bin/hgGateway" target="_blank">DFCI gateway</a>.&nbsp;</p> </div> <div class="field field--name-field-users field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/20" hreflang="en">Basic researchers</a></div> </div> <div class="field field--name-field-access-and-support-url-or- field--type-link field--label-hidden field__item"><a href="http://rcapps2.dfci.harvard.edu./">Genome Browser</a></div> Wed, 04 Sep 2019 15:14:07 +0000 KRT9 56 at https://informatics-analytics.dfci.harvard.edu Sequencher https://informatics-analytics.dfci.harvard.edu/sequencher <span class="field field--name-title field--type-string field--label-hidden">Sequencher</span> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/7" typeof="schema:Person" property="schema:name" datatype="">KRT9</span></span> <span class="field field--name-created field--type-created field--label-hidden">Wed, 09/04/2019 - 11:11</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">DFCI hosts a set of Sequencher site licenses for use by the DFCI community</div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>Sequencher empowers the benchtop scientist by bringing the latest peer-reviewed NGS algorithms out of the command line and into an intuitive point and click interface.&nbsp;Whether performing reference-guided alignments, de novo assembly, variant calling, or SNP analyses.</p> </div> <div class="field field--name-field-users field--type-entity-reference field--label-hidden field__items"> <div class="field__item"><a href="/taxonomy/term/20" hreflang="en">Basic researchers</a></div> </div> <div class="field field--name-field-access-and-support-url-or- field--type-link field--label-hidden field__item"><a href="https://wiki.dfci.harvard.edu:8443/rcsud/frontline-support/application-licensing-and-installation/sequencher">RCS Wiki: Sequencher</a></div> <div class="field field--name-field-fast-find-service-link field--type-entity-reference field--label-hidden field__item"><a href="/taxonomy/term/4" hreflang="en">Basic Research Software</a></div> Wed, 04 Sep 2019 15:11:45 +0000 KRT9 55 at https://informatics-analytics.dfci.harvard.edu Matlab https://informatics-analytics.dfci.harvard.edu/matlab <span class="field field--name-title field--type-string field--label-hidden">Matlab</span> <span class="field field--name-uid field--type-entity-reference field--label-hidden"><span lang="" about="/user/7" typeof="schema:Person" property="schema:name" datatype="">KRT9</span></span> <span class="field field--name-created field--type-created field--label-hidden">Wed, 09/04/2019 - 11:07</span> <div class="clearfix text-formatted field field--name-field-brief-description field--type-text field--label-hidden field__item">MatLab will no longer be supported at the enterprise or department level</div> <div class="clearfix text-formatted field field--name-body field--type-text-with-summary field--label-hidden field__item"><p>Matlab will no longer be supported and new licenses are not available.&nbsp;Existing licenses will be honored.<br /> Here are some links to similar&nbsp;programming tools. &nbsp;Please understand that we are not able to provide support for these applications and they are just suggestions for your information:</p> <ul style="margin-top:0in" type="disc"> <li><span style="mso-fareast-font-family:&quot;Times New Roman&quot;">Jupyter Notebooks: <a href="https://jupyter.org/" target="_blank">https://jupyter.org/</a><o:p></o:p></span></li> <li class="MsoListParagraph" style="margin-left:0in;mso-list:l0 level1 lfo1"><span style="mso-fareast-font-family:&quot;Times New Roman&quot;">Python: <a href="https://www.python.org/" target="_blank">https://www.python.org/</a><o:p></o:p></span></li> <li class="MsoListParagraph" style="margin-left:0in;mso-list:l0 level1 lfo1"><span style="mso-fareast-font-family:&quot;Times New Roman&quot;">“R”: <a href="https://www.r-project.org" target="_blank">https://www.r-project.org</a>/<o:p></o:p></span></li> </ul> </div> Wed, 04 Sep 2019 15:07:04 +0000 KRT9 52 at https://informatics-analytics.dfci.harvard.edu